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Recent refereed publications of the Nonlinear Physics Group on breathers and related issues.

  Preprints (4)   To appear (0)   2012 (1)   2011 (14)   2010 (4)   2009 (14)   2008 (9)   2007 (3)   2006 (9)   2005 (10)   2004 (11)   2003 (9)   2002 (6)   2001 (4)   Previous (1)

Preprints:

  1. Breathers for the Discrete Nonlinear Schrödinger equation with nonlinear hopping.
    NI Karachalios, B Sánchez-Rey, PG Kevrekidis and J Cuevas (abstract and pdf copy)
    Preprint.

  2.  Breathers in oscillator chains with Hertzian interactions
    G James, PG Kevrekidis and J Cuevas (abstract and pdf copy)
    Preprint. Submitted in November 2011.
  3. Dark lattice solitons in one-dimensional waveguide arrays with defocusing saturable nonlinearities and alternating couplings
    A Kanshu, CE Rüter, D Kip, J Cuevas and PG Kevrekidis (abstract and pdf copy)
    Preprint. Submitted in February 2012.
  4. Beating dark-dark solitons in Bose-Einstein condensates
    D. Yan, J.J. Chang, C. Hamner, M. Hoefer, P.G. Kevrekidis, P. Engels, V. Achilleos, D.J. Frantzeskakis and J. Cuevas (abstract and pdf copy)
    Preprint. Submitted in February 2012.

To appear

2012

  1.  Generation of localized modes in an electrical lattice using subharmonic driving.
    LQ English, F Palmero, P Candiani, J Cuevas, R Carretero-González, PG Kevrekidis and AJ Sievers (abstract and pdf copy)
    Phys. Rev. Lett. 108, 084101 (2012). doi: 10.1103/PhysRevLett.108.084101  

2011

  1. Collisions of Discrete Breathers in Nonlinear Schrödinger and Klein–Gordon Lattices
    J Cuevas, A Alvarez, FR Romero and JFR Archilla(abstract and pdf copy)
    In J.A.T. Machado et al (eds), Nonlinear Science and Complexity, Part 4, 159-164, Springer-Verlag, 2011. ISBN: 978-90-481-9883-2; doi:10.1007/978-90-481-9884-9_20

  2. Stability of non-time-reversible phonobreathers.
    J Cuevas, JFR Archilla and FR Romero (abstract and pdf copy)
    J. Phys. A: Math. Theor. (2011) 44 035102. (Published on line in December 2010); doi: 10.1088/1751-8113/44/3/035102

  3. Nonsymmetric moving breather collisions in the Peyrard-Bishop DNA model.
    A Alvarez, FR Romero, JM Romero and JFR Archilla (abstract and pdf copy)
    Discrete and Continuous Dynamical Systems - Series S, 4(5):995-1006, October 2011 (online December 2010); doi: 10.3934/dcdss.2011.4.995

  4. Interaction of moving discrete breathers with simulated interstitial defects.
    J Cuevas, B Sánchez-Rey, JC Eilbeck and FM Russell (abstract and pdf copy)
    Discrete and Continuous Dynamical Systems - Series S, 4(5):1057-1067, October 2011 (online December 2010); doi: 10.3934/dcdss.2011.4.1057

  5. Breathers and kinks in a simulated crystal experiment.
    Q Dou, J Cuevas, JC Eilbeck, FM Russell (abstract and pdf copy)
    Discrete and Continuous Dynamical Systems - Series S, 4(5):1107-1118, October 2011 (online December 2010); doi: 10.3934/dcdss.2011.4.1107

  6. Dark-Bright Discrete Solitons: A Numerical Study of Existence, Stability and Dynamics.
    A Alvarez, J Cuevas, FR Romero and PG Kevrekidis (abstract and pdf copy)
    Physica D 240(8-1):767-778, April 2011 (online December 30, 2010); doi:10.1016/j.physd.2010.12.006

  7. Existence of dark solitons in a class of stationary nonlinear Schrödinger equations
    J Belmonte-Beitia and J Cuevas(abstract and pdf copy)
    J. Math. Phys. 52:032702, March 2011; doi:10.1063/1.3559118

  8. Reaction rate theory with account of the crystal anharmonicity
    VI Dubinko, P.A. Selyshchev and JFR Archilla (abstract and pdf copy)
    Phys Rev E 83, 041124, April 2011; doi: 10.1103/PhysRevE.83.041124

  9. Josephson tunneling of dark solitons in a double-well potential.
    H Susanto, J Cuevas and P Krüger (abstract and pdf copy)
    J. Phys. B: At. Mol. Opt. Phys. 44 (2011) 095003. doi:10.1088/0953-4075/44/9/095003

  10. Quasi-discrete microwave solitons in a split ring resonator-based left-handed coplanar waveguide
    GP Veldes, J Cuevas, PG Kevrekidis and DJ Frantzeskakis (abstract and pdf copy)
    Phys. Rev. E 83, 046608 (2011). doi: 10.1103/PhysRevE.83.046608

  11. Dark-bright gap solitons in coupled-mode one-dimensional saturable waveguide arrays..
    R Dong, CE Rüter, D Kip, J Cuevas, PG Kevrekidis, D Song and J Xu  (abstract and pdf copy)
    Phys. Rev. A 83, 063816 (2011). doi: 10.1103/PhysRevA.83.063816

  12. Nonlinear Excitations, Stability Inversions and Dissipative Dynamics in Quasi-one-dimensional Polariton Condensates.
    J Cuevas, AS Rodrigues, R Carretero-González, PG Kevrekidis and DJ Frantzeskakis (abstract and pdf copy)
    Phys. Rev. B 83, 245140 (2011). doi: 10.1103/PhysRevB.83.245140

  13. Discrete breathers in a nonlinear electric line: Modeling, Computation and Experiment.
    F Palmero, LQ English, J Cuevas, R Carretero-González and PG Kevrekidis (abstract and pdf copy)
    Phys. Rev. E 84, 026605 (2011). doi: 10.1103/PhysRevE.84.026605

  14. Multibreather and vortex breather stability in Klein--Gordon lattices: Equivalence between two different approaches.
    J Cuevas, V Koukouloyannis, PG Kevrekidis and JFR Archilla (abstract and pdf copy)
    International Journal of Bifurcation and Chaos 21, 8 (2011) 2161-2177. doi: 10.1142/S0218127411029690

2010

  1. Traveling and stationary intrinsic localized 
    modes and their spatial control in electrical lattices.
    L. Q. English, F. Palmero, A. J. Sievers, P. G. Kevrekidis, and D. H. Barnak (abstract and pdf copy)
    Phys. Rev. E 81, 046605, April 2010, DOI:10.1103/PhysRevE.81.046605.

  2. Regular and chaotic transport of discrete solitons in asymmetric potentials.
    J Cuevas, B Sánchez-Rey, M Salerno(abstract and pdf copy)
    Phys. Rev. E. 82(1):016604(1-11), July 2010. DOI:10.1103/PhysRevE.82.016604

  3. Energy thresholds for the existence of breather solutions and traveling pulses on lattices
    J Cuevas, NI Karachalios and F Palmero (abstract and pdf copy)
    Applicable Analysis 89(9): 1351-1385, September 2010. DOI: 10.1080/00036810903277135

  4. New classes of stable exact solutions for a nonlinear rotational DNA model
    J Ramírez, JL Romero, FR Romero, A Alvarez and JFR Archilla (abstract and pdf copy)
    Acta Physica Polonica B 41(9):2001–2015, September 2010.

 

2009

  1. Discrete solitons in nonlinear Schrödinger lattices with a power-law nonlinearity
    J Cuevas, PG Kevrekidis, DJ Frantzeskakis and BA Malomed (abstract and pdf copy)
    Physica D 238 (2009) 67-76, January 2009, DOI:10.1016/j.physd.2008.08.013.

  2. Discrete Nonlinear Schrödinger Equations with Time-Dependent Coefficients (Management of Lattice Solitons).
    J. Cuevas and B.A. Malomed (abstract and pdf copy)
    In P.G. Kevrekidis, Ed., The Discrete Nonlinear Schrödinger Equation. Mathematical Analysis, Numerical Computations and Physical Perspectives, Springer ISBN: 978-3-540-89198-7. 2009.

  3. DNLS with Impurities.
    J. Cuevas and F. Palmero. (abstract and pdf copy)
    In P.G. Kevrekidis, Ed., The Discrete Nonlinear Schrödinger Equation Mathematical Analysis, Numerical Computations and Physical Perspectives, Springer ISBN: 978-3-540-89198-7. 2009.

  4. Breathers in inhomogeneous nonlinear lattices : an analysis via centre manifold reduction
    G James, B Sánchez-Rey and J Cuevas (abstract and pdf copy)
    Rev. Math. Phys. 21:1-58, February 2009.

  5. Solitons for the cubic-quintic nonlinear Schrödinger equation with time and space modulated coefficients.
    J Belmonte-Beitia and J Cuevas (abstract and pdf copy)
    Jounal of Physics A: Math. and Theor. 42:165201, March 2009, DOI:10.1088/1751-8113/42/16/165201

  6. Solitons in quasi one-dimensional Bose-Einstein condensates with competing dipolar and local interactions.
    J Cuevas, BA Malomed, PG Kevrekidis and DJ Frantzeskakis (abstract and pdf copy)
    Physical Review A 79:053608, May 2009, DOI:10.1103/PhysRevA.79.053608.

  7. Nucleation of breathers via stochastic resonance in nonlinear lattices.
    D Cubero, J Cuevas and PG Kevrekidis (abstract and pdf copy)
    Physical Review Letters 102:205505, May 2009, DOI:10.1103/PhysRevLett.102.205505.

  8. Discrete breathers in a forced-damped array of coupled pendula: Modeling, Computation and Experiment.
    J Cuevas, LQ English, PG Kevrekidis and M Anderson (abstract and pdf copy)
    Physical Review Letters 102:224101, June 2009, DOI:10.1103/PhysRevLett.102.224101

  9. Vortex solutions of the discrete Gross-Pitaevskii equation.
    J Cuevas, G James, PG Kevrekidis and KJH Law (abstract and pdf copy)
    Physica D 238(15):1422-1431, July 2009, DOI:10.1016/j.physd.2008.10.001.

  10. Moving breather collisions in Klein-Gordon chains of oscillators
    A Alvarez, FR Romero, J Cuevas and JFR Archilla (abstract and pdf copy) Eur. Phys. Jou. B 42(4):543-555, August 2009, DOI:10.1140/epjb/e2009-00256-6.

  11. Interlaced solitons and vortices in coupled DNLS lattices.
    J Cuevas, QE Hoq, H Susanto and PG Kevrekidis (abstract and pdf copy)
    Physica D 238: 2216-2226 (2009). DOI:10.1016/j.physd.2009.09.002.

  12.  Moving Breather Collisions in the Peyrard-Bishop DNA Model.
    A Alvarez, J Cuevas, FR Romero and JFR Archilla  (abstract and pdf copy)
    In J Zhou Ed, Complex Sciences, Vol4, part 1: 411-416, June 2009, ISBN: 978-3-642-02465-8 (print) 978-3-642-02466-5 (online).
    Lecture Notes of the Institute for Computer Sciences, Social Informatics and Telecommunications Engineering
    DOI:10.1007/978-3-642-02466-5_39

  13. Vortex Solutions of the Defocusing Discrete Nonlinear Schrödinger Equation.
    J Cuevas, G James, PG Kevrekidis and KJH Law (abstract and pdf copy)
    AIP Conference Proceedings 1168: 135-138 (2009).

  14. Lower and upper estimates on the excitation threshold for breathers in DNLS lattices
    J Cuevas, NI Karachalios and F Palmero (abstract and pdf copy)
    Journal of Mathematical Physics 50:112705(1-10), November 2009, DOI:10.1063/1.3263142.

2008

  1. Discrete moving breather collisions in a Klein-Gordon chain of oscillators.
    A Alvarez, FR Romero, J Cuevas and JFR Archilla (abstract and pdf copy)
    Phys. Lett. A, 372(8), 1256-1264, February 2008, DOI:10.1016/j.physleta.2007.09.035

  2. Effect of breather existence on reconstructive transformations in mica muscovite
    JFR Archilla, J Cuevas and FR Romero (abstract and pdf copy)
    Proceedings of the The 5th International Workshop on Complex Systems, Sendai, Japan, September 25-28, 2007.
    AIP Conference Proceedings, 982(1):788-791, February 2008, DOI:10.1063/1.2897904

  3. A lower bound for the power of periodic solutions of the defocusing Discrete Nonlinear Schrödinger equation
    J Cuevas, JC Eilbeck and NI Karachalios (abstract and pdf copy)
    Dynamics of PDE 5 (1), 69-85, March 2008.

  4. Thresholds for breather solutions on the Discrete Nonlinear Schrödinger Equation with saturable and power nonlinearity
    J Cuevas, JC Eilbeck and NI Karachalios (abstract and pdf copy)
    Discrete and Continuous Dynamics Systems - Series A 21 (2), 445-475, March 2008.

  5. Solitons in one-dimensional nonlinear Schrödinger lattices with a local inhomogeneity
    F Palmero, R Carretero-González, J Cuevas, PG Kevrekidis and W Królikowski (abstract and pdf copy)
    Physical Review E, 77, 036614, March 2008, DOI:10.1103/PhysRevE.77.036614

  6. Travelling Solitary Waves in the Discrete Nonlinear Schrödinger equation with Saturable nonlinearity: Existence, Stability and Dynamics
    TRO Melvin, AR Champneys, PG Kevrekidis and J Cuevas (abstract and pdf copy)
    Physica D, 237,(4) 551-567, April 2008, DOI:10.1016/j.physd.2007.09.026.

  7. A neutron scattering study of strong symmetric hydrogen bonds in potassium and cesium hydrogen bistrifluoroacetates: Determination of the crystal structures and of the single-well potentials for protons
    F Fillaux, A Cousson, JFR Archilla and J Tomkinson (abstract and pdf copy)
    J. Chem. Phys., 128, 204502,1-11, May 2008. DOI:10.1063/1.2927353.
    Selected by the Virtual Journal of Biological Physics Research 15(11), June 1, 2008.

  8. Approximation of solitons in the discrete NLS equation
    J Cuevas, G James, PG Kevrekidis, BA Malomed and B Sánchez-Rey (abstract and pdf copy)
    Journal of Nonlinear Mathematical Physics 15 (Proceedings NEEDS'07), pages 124-136. October 2008.

  9. Discrete breathers collisions in nonlinear Schrödinger and Klein-Gordon lattice
    J Cuevas, A Alvarez, FR Romero and JFR Archilla (abstract and pdf copy)
    CD-ROM:Proceedings of the 2nd Conference on Nonlinear Science and Complexity. Porto, Portugal, July 28-31, 2008
    Editors: J.A. Tenreiro Machado, M.F. Silva, R.S. Barbosa and L.B. Figuereido
    ISBN: 978-972-8688-56-1

2007

  1. Two-dimensional discrete solitons in rotating lattices
    J Cuevas, BA Malomed and PG Kevrekidis (abstract and pdf copy)
    Phys. Rev E 76, 046608, 2007, DOI:10.1103/PhysRevE.76.046608.

  2. Localization and Transport of Charge by Nonlinearity and Spatial Discreteness in Biomolecules and Semiconductor Nanorings. Aharonov-Bohm effect for neutral excitons.
    F Palmero, J Cuevas, FR Romero, JC Eilbeck, RA Römer and J Dorignac (abstract and pdf copy)
    In SE Lyshevski, Ed., Handbook on Nano- and Molecular Electronics, pages: 15.1-15.28. CRC Press (Taylor and Francis Group). ISBN: 0849385288. London 2007.

  3. Dynamics of the Davydov/Scott monomer in a thermal bath. Comparison of the full quantum and semiclassical approaches
    J Cuevas, PAS Silva, FR Romero and L Cruzeiro (abstract and pdf copy)
    Phys. Rev E 76, 011907, July 2007, DOI:10.1103/PhysRevE.76.011907.

2006

  1. Discrete breathers for understanding reconstructive mineral processes at low temperatures
    JFR Archilla, J Cuevas, MD Alba, M Naranjo and JM Trillo (abstract and pdf copy)
    J. Phys. Chem. B 110 (47): 24112-24120, November 2006, DOI:10.1021/jp0631228.

  2. Breathers in Quantum Lattices.
    F Palmero (abstract and pdf copy). With JC Eilbeck.
    In P Alberigo, G Erbacci and F Garofalo, Eds. Science and Supercomputing in Europe (report 2005) , pages 758-762. CINECA, Bologna (Italy), 2006. ISBN 88-86037-17-1.

  3. Radiationless travelling waves in saturable nonlinear Schrödinger lattices
    TRO Melvin, AR Champneys, PG Kevrekidis and J Cuevas (abstract and pdf copy)
    Phys. Rev. Lett. 97:124101-1/4, September 2006.
    DOI:10.1103/PhysRevLett.97.124101

  4. Existence of bound states of a polaron with a breather in soft potentials
    J Cuevas, PG Kevrekidis, DJ Frantzeskakis and AR Bishop (abstract and pdf copy)
    Phys. Rev. B 74: 064304/1-12, August 2006.
    DOI:10.1103/PhysRevB.74.064304
    Selected by the Virtual Journal of Biological Physics Research    12(5) (Statistical and Nonlinear Physics) September 1, 2006. (Statistical and Nonlinear Physics) September 1, 2006.

  5. Soliton collisions in a waveguide array with saturable nonlinearity
    J Cuevas and JC Eilbeck (abstract and pdf copy)
    Phys. Lett. A 358:15-20, May 2006. DOI:10.1016/j.physleta.2006.04.095

  6. Breather trapping and breather transmission in a DNA model with an interface.
    A Alvarez, FR Romero, JFR Archilla, J Cuevas and PV Larsen (abstract and pdf copy)
    Eur. Phys. J. B 51(1):119-130, May 2006, DOI:10.1140/epjb/e2006-00191-0

  7. Polaronic charge transport mechanism in DNA
    D Hennig and JFR Archilla (abstract and pdf copy)
    In E Starikov, J Lewis and S Tanaka, editors, Modern methods for theoretical physical chemistry of biopolymers, chapter 22, pages 429-450. Elsevier, May 2006. ISBN: 0-444-52220-4.

  8. Overdamped deterministic ratchets driven by multifrequency forces
    D Cubero, J Casado-Pascual, A Alvarez, M Morillo and P Hänggi (abstract and pdf copy)
    Acta Physica Polonica B 37(5):1467–1477, May 2006.

  9. Interaction of moving discrete breathers with vacancies
    J Cuevas, JFR Archilla, B Sánchez-Rey and FR Romero (abstract and pdf copy)
    Physica D 216(1):115–120, March 13, 2006, DOI:10.1016/j.physd.2005.12.022

2005

  1. Classical and quantum nonlinear localized excitations in discrete systems.
    FR Romero, JFR Archilla, F Palmero, B Sánchez-Rey, A Alvarez, J Cuevas and JM Romero (abstract and pdf copy)
    In SG Pandalai, editor, Recent Research Developments in Physics, vol 6, part II, pages 531-570.
    Transworld Research Network, Kerala, India, 2005. ISBN: 81-7895-171-1.

  2. Aharonov-Bohm effect for an exciton in a finite width nano-ring
    F Palmero, J. Dorignac, JC Eilbeck, RA Römer (abstract and pdf copy)
    Phys. Rev. B 72, 075343, August, 2005, (10 pages), DOI:10.1103/PhysRevB.72.075343.
    Selected by the Virtual Journal of Nanoscale Science & Technology, August 29, 2005.

  3. Analytical approach to soliton ratchets in asymmetric potentials
    NR Quintero, B Sánchez-Rey and M Salerno (abstract and pdf copy)
    Phys. Rev. E 72, 016610, July 2005, (8 pages), DOI:10.1103/PhysRevE.72.016610

  4. Motion of discrete solitons assisted by nonlinearity management
    J Cuevas, BA Malomed and PG Kevrekidis (abstract and pdf copy)
    Phys. Rev. E 71,066614, June 2005, (8 pages), DOI:10.1103/PhysRevE.71.066614

  5. Discrete peakons
    A Comech, J Cuevas and PG Kevrekidis (abstract and pdf copy)
    Physica D, 207 (3-4): 137-160, August 2005, DOI:10.1016/j.physd.2005.05.019

  6. Localization Properties of Electronic States in a Polaron Model of poly(dG)-poly(dC) and poly(dA)-poly(dT) DNA polymers
    H Yamada, EB Starikov, D Hennig and JFR Archilla (abstract and pdf copy)
    Eur. Phys. J. E 17(2):149-154, June 2005, DOI:10.1140/epje/i2004-10135-8

  7. Comment on "Soliton ratchets induced by excitation of internal modes"
    NR Quintero, B Sánchez-Rey and J Casado-Pascual (abstract and pdf copy)
    Phys. Rev. E 71, 058601, May 2005, (2 pages), DOI:10.1103/PhysRevE.71.058601

  8. Exact Dark Waves on the Discrete Nonlinear Schrödinger Equation
    B Sánchez-Rey and M Johansson (abstract and pdf copy)
    Phys. Rev E 7, 036627 (2005) (11 pages), DOI:10.1103/PhysRevE.71.036627

  9. Modeling the thermal evolution of enzyme-created bubbles in DNA
    D Hennig, JFR Archilla, JM Romero (abstract and pdf copy)
    Interface, 2(2):89-95, February 2005, DOI:10.1098/rsif.2004.0024

  10. Effect of the introduction of impurities on the stability properties of multibreathers at low coupling
    J Cuevas, JFR Archilla and FR Romero (abstract and pdf copy)
    Nonlinearity 18*(2):769–790, 2005, DOI:10.1088/0951-7715/18/2/016

2004

  1. Moving breathers in bent DNA with realistic parameters
    J Cuevas, EB Starikov and JFR Archilla and D Hennig (abstract and pdf copy)
    Mod. Phys. Lett. B. 18(25):1319-1326, 2004, DOI:10.1142/S0217984904007840

  2. Stretching and relaxation dynamics in double stranded DNA
    D Hennig and JFR Archilla (abstract and pdf copy)
    Physica A, 331(3-4): 579-601, January 2004, DOI:10.1016/j.physa.2003.09.053
    Selected by The Virtual Journal Physics of Life, 2004(1), April 2004, section: Nucleic Acids - DNA sequences.

  3. Multi-site H-bridge breathers in a DNA–shaped double strand
    D Hennig and JFR Archilla (abstract and pdf copy)
    Physica Scripta, 69(2):150-160, 2004, DOI:10.1238/Physica.Regular.069a00150

  4. Effect of base-pair inhomogeneities on charge transport along the DNA molecule, mediated by twist and radial polarons
    F Palmero, JFR Archilla, D Hennig and FR Romero (abstract and pdf copy)
    New. J. Phys. 6:13.1-13.16, 2004, DOI:10.1088/1367-2630/6/1/013

  5. Energy funneling in a bent chain of Morse oscillators with long-range coupling
    PV Larsen, PL Christiansen, O Bang, JFR Archilla and Yu B Gaididei (    abstract and pdf copy)
    Phys. Rev. E 69:026603/1-6, February 17, 2004, DOI:10.1103/PhysRevE.69.026603
    Selected by the Virtual Journal of Biological Physics Research 7(5), March 1, 2004.

  6. Breather statics and dynamics in Klein-Gordon chains with a bend.
    J Cuevas and PG Kevrekidis (abstract and pdf copy)
    Phys. Rev. E, 69: 056609/1-13, May 20, 2004, DOI:10.1103/PhysRevE.69.056609
    Selected by the Virtual Journal of Biological Physics Research 7(11), June 1, 2004.

  7. Bright and dark breathers in Fermi-Pasta-Ulam lattices
    B Sánchez-Rey, G James, J Cuevas and JFR Archilla (abstract and pdf copy)
    Phys. Rev. B 70:014301/1-10, July 9, 2004, DOI:10.1103/PhysRevB.70.014301

  8. Quantum breathers in an attractive fermionic Hubbard model,
    JC Eilbeck and F Palmero (abstract and pdf copy)
    In FK Abdullaev and VV Konotop, editors, Nonlinear Waves: Classical and Quantum Aspects, Kluwer, Amsterdam, pages 399-412, 2004. ISBN: 1-4020-2188-7. arXiv:nlin.PS/0310043.

  9. Bubble generation in a twisted and bent DNA-like model
    PV Larsen, PL Christiansen, O Bang, JFR Archilla and Yu B Gaididei (abstract and pdf copy)
    Phys. Rev. E 70: 036609/1-6, 2004, DOI:10.1103/PhysRevE.70.036609
    Selected by theVirtual Journal of Biological Physics Research 8(7), October 1, 2004.

  10. Trapping in quantum chains
    JC Eilbeck and F Palmero (abstract and pdf copy)
    Phys. Lett. A, 331(3-4):201-208, 2004, DOI:10.1016/j.physleta.2004.08.060

  11. Charge transport in poly(dG)-poly(dC) and poly(dA)-poly(dT) DNA polymers.
    D Hennig, E Starikov, JFR Archilla and F Palmero (abstract and pdf copy)
    Journal of Biological Physics 30 (3): 227-238, 2004, DOI:10.1023/B:JOBP.0000046721.92623.a9

2003

  1. Demonstration of the stability or instability of multibreathers at low coupling.
    JFR Archilla, J Cuevas, B Sánchez-Rey and A Alvarez (abstract and pdf copy)
    Physica D, 180(3-4):235-255, 2003, DOI:10.1016/S0167-2789(03)00064-2

  2. Nonlinear charge transport mechanism in periodic and disordered DNA
    D Hennig, JFR Archilla and J Agarwal (abstract and pdf copy)
    Physica D 180(3-4):256-272, 2003, DOI:10.1016/S0167-2789(03)00053-8
    Selected by The Virtual Journal Physics of Life, 2003(2), July 2003, section: Nucleic Acids - DNA sequences.

  3. Charge transport in a nonlinear, three-dimensional DNA model with disorder.
    JFR Archilla, D Hennig and J Agarwal (abstract and pdf copy)
    In L Vázquez, MP Zorzano, RS Mackay, editors. Localization and Energy Transfer in Nonlinear Systems, pages 153-160. World Scientific, Singapore, 2003. ISBN 981-238-296-8.

  4. Interaction of moving breathers with an impurity.
    J Cuevas, F Palmero, JFR Archilla and FR Romero (abstract and pdf copy)
    In L Vázquez, MP Zorzano, RS Mackay, editors. Localization and Energy Transfer in Nonlinear Systems, pages 256-259. World Scientific, Singapore, 2003. ISBN 981-238-296-8.

  5. Breathers in FPU systems, near and far from the phonon band.
    B Sánchez-Rey, JFR Archilla, G James and J Cuevas (abstract and pdf copy)
    In L Vázquez, MP Zorzano, RS Mackay, editors. Localization and Energy Transfer in Nonlinear Systems, pages 342-343. World Scientific, Singapore, 2003. ISBN 981-238-296-8.

  6. Influence of moving breathers on vacancies migration.
    J Cuevas, C Katerji, JFR Archilla, JC Eilbeck and FM Russell (abstract and pdf copy)
    Phys. Lett. A 315(5):364-371, 2003, DOI:10.1016/S0375-9601(03)01097-1

  7. Interaction of moving localized oscillations with a local inhomogeneity in nonlinear Hamiltonian Klein-Gordon lattices.
    J Cuevas, F Palmero, JFR Archilla and FR Romero (abstract and pdf copy)
    Theoretical and Mathematical Physics, 137(1): 1406-1411, October, 2003, DOI:10.1023/A:1026048521794

  8. The Calogero–Bogoyavlenskii–Schiff equation in 2+1 dimensions
    MS Bruzón, ML Gandarias, C Muriel, J Ramírez, S Saez and FR Romero (abstract and pdf copy)
    Theoretical and Mathematical Physics, 137(1): 1367-1377, October, 2003, DOI:10.1023/A:1026040319977

  9. Traveling-wave Solutions of the Schwarz–Korteweg–de Vries equation in 2+1 dimensions and the Ablowitz–Kaup–Newell–Segur equation through symmetry reductions
    MS Bruzón, ML Gandarias, C Muriel, J Ramírez and FR Romero (abstract and pdf copy)
    Theoretical and Mathematical Physics, 137(1): 1378-1389, October, 2003, DOI:10.1023/A:1026092304047

2002

  1. Moving breathers in a DNA model with competing short and long range dispersive interactions
    J Cuevas, JFR Archilla, Yu B Gaididei and FR Romero (abstract and pdf copy)
    Physica D 163:106-126, 2002, DOI:10.1016/S0167-2789(02)00351-2
    Selected by The Virtual Journal Physics of Life, 2002(2), May 2002, section: Nucleic Acids - DNA statics.

  2. Moving breathers in a bent DNA-related model
    J Cuevas, F Palmero, JFR Archilla and FR Romero (abstract and pdf copy)
    Physics Letters A 299(2-3):221-225, 2002, DOI:10.1016/S0375-9601(02)00731-4

  3. Breathers in a system with helicity and dipole interaction
    B Sánchez-Rey, JFR Archilla, F Palmero and FR Romero (abstract and pdf copy)
    Physical Review E 66:017601-017604, 2002, DOI:10.1103/PhysRevE.66.017601
    Selected by Virtual Journal of Biological Physics Research 4(1), July 1, 2002.

  4. Dark breathers in Klein-Gordon lattices. Band analysis of their stability properties.
    A Alvarez, JFR Archilla, J Cuevas and FR Romero (abstract and pdf copy)
    New J. Phys. 4:72.1-72.19, 2002, DOI:10.1088/1367-2630/4/1/372

  5. Stationary and moving breathers in a simplified model of curved alpha--helix proteins
    JFR Archilla, Yu B Gaididei, PL Christiansen and J Cuevas (abstract and pdf copy)
    J. Phys. A: Math. Gen. 35:8885-8902, 2002, DOI:10.1088/0305-4470/35/42/301

  6. Moving discrete breathers in a Klein--Gordon chain with an impurity.
    J Cuevas, F Palmero, JFR Archilla and FR Romero (abstract and pdf copy)
    J. Phys. A: Math. Gen. 35:10519-10530, 2002, DOI:10.1088/0305-4470/35/49/302

2001

  1. Numerical study of two-dimensional disordered Klein-Gordon lattices with cubic soft anharmonicity
    J Cuevas, JFR Archilla, F Palmero and FR Romero (abstract and pdf copy)
    J Phys A-Math Gen 34 (16): L221-L230, 2001, DOI:10.1088/0305-4470/34/16/101

  2. Numerical study of breathers in a bent chain of oscillators with long range interaction
    JFR Archilla, PL Christiansen, SF Mingaleev and Yu B Gaididei (abstract and pdf copy)
    J Phys A-Math Gen 34 (33): 6363-6373 Aug 24 2001, DOI:10.1088/0305-4470/34/33/301

  3. Interplay of nonlinearity and geometry in a DNA-related, Klein-Gordon model with long-range, dipole-dipole interaction.
    JFR Archilla, PL Christiansen, Yu B Gaididei (abstract and pdf copy)
    Phys. Rev. E. 65(1): 016609/1-6. 2001, DOI:10.1103/PhysRevE.65.016609

  4. Taming chaos in a driven Josephson junction.
    R Chacon, F Palmero, F. Balibrea. (abstract and pdf copy)
    International Journal of Bifurcation and Chaos in Applied Sciences and Engineering 11 (7):1897-909, 2001, DOI:10.1142/S0218127401003073


Previous breather paper

Discrete breathers and Anderson modes: two faces of the same phenomenon?
JFR Archilla, RS MacKay and JL Marín (abstract and pdf copy)
Physica D. 134 (4):406-18, 1999, DOI:10.1016/S0167-2789(99)00131-1
Latex files gfnl.bib and gfnl.bbl
Nonlinear Physics Group
http://grupo.us.es/gfnl